TAP SET in Phyllostachys heterocycla

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys

Protein source: BambooGDB


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SET
PHD
zf-C2H2
TCR
Myb_DNA-binding
CXC

(Domain names are clickable)



List of proteins (47)

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PH01000002G2930PH_genemodel_v1 PH01000002..2061911..2076450 . + . ID=PH01000002G2930;Name=histone-lysine N-methyltransferase, putative, expressed
PH01000009G0160PH_genemodel_v1 PH01000009..114548..117791 . - . ID=PH01000009G0160;Name=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
PH01000023G2040PH_genemodel_v1 PH01000023..1293042..1296632 . + . ID=PH01000023G2040;Name=histone-lysine N-methyltransferase, putative, expressed
PH01000029G1730PH_genemodel_v1 PH01000029..1151801..1155060 . + . ID=PH01000029G1730;Name=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
PH01000042G0690PH_genemodel_v1 PH01000042..421147..424358 . + . ID=PH01000042G0690;Name=histone-lysine N-methyltransferase, putative, expressed
PH01000110G1200PH_genemodel_v1 PH01000110..900908..908943 . - . ID=PH01000110G1200;Name=SET domain containing protein, expressed
PH01000111G0040PH_genemodel_v1 PH01000111..15245..18679 . - . ID=PH01000111G0040;Name=SET domain containing protein, expressed
PH01000113G0120PH_genemodel_v1 PH01000113..87223..89393 . - . ID=PH01000113G0120;Name=tetratricopeptide repeat domain containing protein
PH01000181G1140PH_genemodel_v1 PH01000181..714853..725971 . - . ID=PH01000181G1140;Name=SET domain containing protein, expressed
PH01000182G1350PH_genemodel_v1 PH01000182..892544..903561 . - . ID=PH01000182G1350;Name=SET domain containing protein, expressed
PH01000202G0830PH_genemodel_v1 PH01000202..612706..615900 . - . ID=PH01000202G0830;Name=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
PH01000239G0590PH_genemodel_v1 PH01000239..411803..421992 . - . ID=PH01000239G0590;Name=expressed_protein
PH01000239G1240PH_genemodel_v1 PH01000239..886671..894176 . + . ID=PH01000239G1240;Name=SET domain containing protein, expressed
PH01000289G1030PH_genemodel_v1 PH01000289..701877..705011 . - . ID=PH01000289G1030;Name=histone-lysine N-methyltransferase ASHR2, putative, expressed
PH01000345G0370PH_genemodel_v1 PH01000345..317769..327301 . - . ID=PH01000345G0370;Name=SET domain containing protein, expressed
PH01000444G0090PH_genemodel_v1 PH01000444..56873..60774 . + . ID=PH01000444G0090;Name=ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed
PH01000457G0580PH_genemodel_v1 PH01000457..370139..373121 . + . ID=PH01000457G0580;Name=ATXR, putative
PH01000459G0800PH_genemodel_v1 PH01000459..559896..566079 . - . ID=PH01000459G0800;Name=SET domain containing protein
PH01000556G0480PH_genemodel_v1 PH01000556..279320..284244 . - . ID=PH01000556G0480;Name=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
PH01000558G0660PH_genemodel_v1 PH01000558..450494..458637 . - . ID=PH01000558G0660;Name=zinc finger protein, putative, expressed
PH01000562G0540PH_genemodel_v1 PH01000562..391423..395319 . - . ID=PH01000562G0540;Name=SET domain protein 123, putative, expressed
PH01000650G0430PH_genemodel_v1 PH01000650..359556..363030 . + . ID=PH01000650G0430;Name=zinc finger protein, putative, expressed
PH01000662G0490PH_genemodel_v1 PH01000662..307829..311817 . + . ID=PH01000662G0490;Name=SET domain protein SDG117, putative, expressed
PH01001067G0330PH_genemodel_v1 PH01001067..243209..253735 . + . ID=PH01001067G0330;Name=SET domain containing protein, expressed
PH01001114G0220PH_genemodel_v1 PH01001114..136859..142509 . + . ID=PH01001114G0220;Name=SET domain containing protein, expressed
PH01001227G0270PH_genemodel_v1 PH01001227..199365..209511 . + . ID=PH01001227G0270;Name=ATXR, putative, expressed
PH01001246G0330PH_genemodel_v1 PH01001246..205806..210159 . + . ID=PH01001246G0330;Name=SET domain-containing protein, putative, expressed
PH01001461G0410PH_genemodel_v1 PH01001461..242280..251448 . - . ID=PH01001461G0410;Name=histone-lysine N-methyltransferase ATX5, putative, expressed
PH01001517G0140PH_genemodel_v1 PH01001517..126586..129850 . - . ID=PH01001517G0140;Name=histone-lysine N-methyltransferase, putative, expressed
PH01001667G0110PH_genemodel_v1 PH01001667..86809..91277 . + . ID=PH01001667G0110;Name=SET domain containing protein, expressed
PH01001780G0480PH_genemodel_v1 PH01001780..295905..302431 . - . ID=PH01001780G0480;Name=SET domain containing protein, expressed
PH01001874G0240PH_genemodel_v1 PH01001874..154697..164523 . - . ID=PH01001874G0240;Name=SET domain containing protein
PH01002135G0360PH_genemodel_v1 PH01002135..245713..247200 . + . ID=PH01002135G0360;Name=histone-lysine N-methyltransferase, putative, expressed
PH01002144G0130PH_genemodel_v1 PH01002144..83726..89259 . - . ID=PH01002144G0130;Name=YDG/SRA domain containing protein, expressed
PH01002160G0020PH_genemodel_v1 PH01002160..15494..18013 . + . ID=PH01002160G0020;Name=histone-lysine N-methyltransferase, putative, expressed
PH01002228G0280PH_genemodel_v1 PH01002228..183733..187190 . - . ID=PH01002228G0280;Name=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
PH01002245G0200PH_genemodel_v1 PH01002245..132081..138005 . + . ID=PH01002245G0200;Name=zinc finger protein, putative, expressed
PH01002255G0060PH_genemodel_v1 PH01002255..45705..50047 . + . ID=PH01002255G0060;Name=histone-lysine N-methyltransferase, putative, expressed
PH01002279G0200PH_genemodel_v1 PH01002279..154534..158125 . + . ID=PH01002279G0200;Name=histone-lysine N-methyltransferase, putative, expressed
PH01002324G0300PH_genemodel_v1 PH01002324..171595..175979 . - . ID=PH01002324G0300;Name=SET domain containing protein, expressed
PH01002725G0150PH_genemodel_v1 PH01002725..101598..114443 . - . ID=PH01002725G0150;Name=SET domain containing protein, expressed
PH01003338G0030PH_genemodel_v1 PH01003338..9269..11641 . + . ID=PH01003338G0030;Name=ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed
PH01003494G0140PH_genemodel_v1 PH01003494..102807..107033 . + . ID=PH01003494G0140;Name=SET domain containing protein, expressed
PH01003539G0030PH_genemodel_v1 PH01003539..20917..26209 . - . ID=PH01003539G0030;Name=histone-lysine N-methyltransferase, putative, expressed
PH01005391G0020PH_genemodel_v1 PH01005391..2603..7304 . - . ID=PH01005391G0020;Name=translin, putative, expressed
PH01006470G0010PH_genemodel_v1 PH01006470..7006..13822 . - . ID=PH01006470G0010;Name=SET domain containing protein, expressed
PH01007418G0030PH_genemodel_v1 PH01007418..17971..23952 . + . ID=PH01007418G0030;Name=SET domain protein SDG117, putative, expressed
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum